On one level, converting between cgs and mks metric units is trivial since it's just a matter of powers of 10. However, cgs units, as used by scientists set c (the speed of light) and h-bar (planks constant divided by 2pi) equal to one. This simplifies the math since these constants pop up all over the place and it can be a chore to keep track of where they belong. So you do the calculations without them and then plug in the proper combination at the end to make the units come out right. The main place this pops up in in electromagnetism where you can enounter the cgs unit of charge called the electrostatic unit (or esu) instead of the mks metric unit of the Coulomb.
Then again, you can run into some very odd units when working with the military. One particularly odd one I've come across is the "kiloyard," which is just another way of saying one thousand yards. The Navy uses this unit of range a lot since one nautical mile is 2 kiloyards within one percent. I once encountered a computer simulation (not written by me!) that measured depths in feet, ranges in kiloyards, and sound speeds in meters per second. Talk about mixed units!
"I often say that when you can measure what you are speaking about, and express it in numbers, you know something about it; but when you cannot measure it, when you cannot express it in numbers, your knowledge is of a meagre and unsatisfactory kind." - William Thompson, 1st Baron Lord Kelvin
"If it was so, it might be, and if it were so, it would be, but as it isn't, it ain't. That's logic!" - Tweedledee
This isn't right. This isn't even wrong. - Wolfgang Pauli